Cytochrome c peroxidase
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Cytochrome c peroxidase, or CCP,( PDB 2CYP (http://www.rcsb.org/pdb/cgi/explore.cgi?pid=81781064090149&page=0&pdbId=2CYP), EC 1.11.1.5) is a water soluble ferric heme containing enzyme in the peroxidase family of enzymes that takes reducing equivalents from cytochrome c and reduces hydrogen peroxide to water.
- CCP + H2O2 + 2 reduced cytochrome c + 2H+ → CCP + 2H2O + 2 oxidized cytochrome c
Cytochrome c peroxidase can react with hydroperoxides other than hydrogen peroxide, but the reaction rate is much slower than with hydrogen peroxide.
It was first isolated from baker's yeast by R. A. Altschul, Abrams, and Hogness in 1940, though not to purity. The first purified preparation of yeast cytochrome c peroxidase dates to Takashi Yonetani and his preparation by ion exchange chromatography in the early 1960s. The X ray structure was the work of Thomas Poulos and coworkers in the late 1970s.
The enzyme is a monomer of molecular weight 34,000, containing 293 amino acids, and contains as well a single noncovalently bound heme b. Unusual for proteins, this enzyme crystallizes when dialyzed against distilled water. More so, the enzyme purifies as a consequence of crystallization, making cycles of crystallization an effective final purification step.
Much like catalase, the reaction of cytochrome c peroxidase proceeds through a three step process, forming first a cytochrome c peroxidase compound I and then a cytochrome c peroxidase compound II.
- CCP + ROOH → CCP-compound I + ROH + H2O
- CCP-compound I + 1e- + 1H+ → CCP-compound II
- CCP-compound II + 1e- + 1H+ → CCP
CCP in the resting state has a ferric heme, and after the addition of 2 oxidizing equivalents from a hydroperoxide, it becomes an enzyme of formal oxidation state V. However, both low temperature magnetic susceptibility measurements and Mossbauer spectroscopy show that the iron in CCP-compound I is a +4 ferryl iron, and not in oxidation state V. The other salient feature of CCP compound I is a long lived free radical, whose signal suggests a species other than the porphyrin free radicals of other peroxidase compound I species. Early on it was recognized to be an organic free radical, with the bulk of evidence now linking it to the side chain of the 51st amino acid residue of CCP, a tryptophan.
Unlike most peroxidases, CCP compound I is fairly long lived, decaying to CCP compound II with a half life at room temperature of 40 minutes to a couple hours.